AssemblyΒΆ
We are going to create an assembly with canu and evaluate it with a mapping to the reference genome and with quast.
- Assembly with canu
- Assembly with canu(2)
- Assembly with canu(3)
- Assembly evaluation with QUAST
- Assembly evaluation with QUAST(2)
- Assembly Graph inspection with Bandage
- Get and inspect the WGS dataset
- Assembly of WGS dataset
- Assembly with WGS dataset(2)
- WGS Assembly evaluation with QUAST
- WGS Assembly evaluation with QUAST(2)
- WGS Assembly Graph inspection with Bandage
- Quality control by mapping
- Quality control by mapping(2)